Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALKBH2 | EPRS1 | ENSCAFP00000016410 | ENSCAFP00000063801 | AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. | Glutamyl-prolyl-tRNA synthetase. | 0.681 |
ALKBH2 | IARS2 | ENSCAFP00000016410 | ENSCAFP00000016236 | AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. | Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.788 |
ALKBH2 | PARS2 | ENSCAFP00000016410 | ENSCAFP00000058891 | AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. | Prolyl-tRNA synthetase 2, mitochondrial. | 0.846 |
ALKBH2 | YARS1 | ENSCAFP00000016410 | ENSCAFP00000015449 | AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. | Tyrosine--tRNA ligase. | 0.714 |
EPRS1 | ALKBH2 | ENSCAFP00000063801 | ENSCAFP00000016410 | Glutamyl-prolyl-tRNA synthetase. | AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. | 0.681 |
EPRS1 | FARS2 | ENSCAFP00000063801 | ENSCAFP00000062707 | Glutamyl-prolyl-tRNA synthetase. | Phenylalanyl-tRNA synthetase 2, mitochondrial. | 0.750 |
EPRS1 | IARS1 | ENSCAFP00000063801 | ENSCAFP00000003387 | Glutamyl-prolyl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
EPRS1 | IARS2 | ENSCAFP00000063801 | ENSCAFP00000016236 | Glutamyl-prolyl-tRNA synthetase. | Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.998 |
EPRS1 | KARS1 | ENSCAFP00000063801 | ENSCAFP00000029741 | Glutamyl-prolyl-tRNA synthetase. | Lysine--tRNA ligase. | 0.999 |
EPRS1 | MARS1 | ENSCAFP00000063801 | ENSCAFP00000000332 | Glutamyl-prolyl-tRNA synthetase. | Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
EPRS1 | PARS2 | ENSCAFP00000063801 | ENSCAFP00000058891 | Glutamyl-prolyl-tRNA synthetase. | Prolyl-tRNA synthetase 2, mitochondrial. | 0.978 |
EPRS1 | RARS1 | ENSCAFP00000063801 | ENSCAFP00000025127 | Glutamyl-prolyl-tRNA synthetase. | Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
EPRS1 | RARS2 | ENSCAFP00000063801 | ENSCAFP00000004577 | Glutamyl-prolyl-tRNA synthetase. | Arginyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.993 |
EPRS1 | YARS1 | ENSCAFP00000063801 | ENSCAFP00000015449 | Glutamyl-prolyl-tRNA synthetase. | Tyrosine--tRNA ligase. | 0.999 |
FARS2 | EPRS1 | ENSCAFP00000062707 | ENSCAFP00000063801 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Glutamyl-prolyl-tRNA synthetase. | 0.750 |
FARS2 | IARS1 | ENSCAFP00000062707 | ENSCAFP00000003387 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.651 |
FARS2 | IARS2 | ENSCAFP00000062707 | ENSCAFP00000016236 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.656 |
FARS2 | KARS1 | ENSCAFP00000062707 | ENSCAFP00000029741 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Lysine--tRNA ligase. | 0.612 |
FARS2 | MARS1 | ENSCAFP00000062707 | ENSCAFP00000000332 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.592 |
FARS2 | PARS2 | ENSCAFP00000062707 | ENSCAFP00000058891 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Prolyl-tRNA synthetase 2, mitochondrial. | 0.800 |
page 1 of 5