STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC8BRIC8 guanine nucleotide exchange factor B. (560 aa)    
Predicted Functional Partners:
RTP1
Receptor transporter protein 1.
      
 0.877
RTP2
Receptor transporter protein 2.
      
 0.825
REEP1
Receptor accessory protein 1.
      
 0.811
OR2K2
Olfactory receptor.
      
 0.783
CDC40
Cell division cycle 40.
   
  
 0.752
GNA14
G protein subunit alpha 14.
   
 
 0.727
OR51E2
Olfactory receptor.
      
 0.691
CNGA4
Cyclic nucleotide gated channel subunit alpha 4.
   
  
 0.674
OR11H7
Olfactory receptor.
      
 0.673
RABIF
RAB interacting factor.
      
 0.668
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.