STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL1LHFPL tetraspan subfamily member 1. (278 aa)    
Predicted Functional Partners:
ALG13
Uncharacterized protein.
   
  
 0.835
ALG13-2
Glyco_tran_28_C domain-containing protein.
      
 0.809
AMOT
Angiomotin.
   
  
 0.726
TRPC5
Transient receptor potential cation channel subfamily C member 5; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.703
RTL4
Retrotransposon Gag like 4.
   
  
 0.489
SLCO6A1
Solute carrier organic anion transporter family member.
   
  
 0.487
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.485
HEATR5B
HEAT repeat containing 5B.
      
 0.483
UBE4B
Ubiquitination factor E4B.
      
 0.483
TTC17
Tetratricopeptide repeat domain 17.
      
 0.483
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.