STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM4V-set and transmembrane domain containing 4. (363 aa)    
Predicted Functional Partners:
LSAMP
Limbic system associated membrane protein.
    
 
 0.530
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
   
 
 0.512
LGALS12
Galectin.
    
 
 0.508
SHROOM1
Shroom family member 1.
      
 0.491
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.482
SLC37A2
Solute carrier family 37 member 2.
    
 
 0.481
NYAP2
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2.
    
 
 0.471
TFAP2D
Transcription factor AP-2 delta.
      
 0.452
GPR22
G protein-coupled receptor 22.
      
 0.451
NCS1
Neuronal calcium sensor 1.
    
 
 0.418
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.