STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1L1YME1 like 1 ATPase. (715 aa)    
Predicted Functional Partners:
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
   0.932
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
   0.931
OMA1
OMA1 zinc metallopeptidase.
   
 
 0.858
PARL
Presenilin associated rhomboid like.
   
 
 0.842
TTC16
Tetratricopeptide repeat domain 16.
    
 
 0.803
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
   
  
 0.782
STOML2
Stomatin like 2.
   
 0.773
CLPP
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.768
MDH1B
Malate dehydrogenase 1B.
  
  
 0.716
PERM1
PPARGC1 and ESRR induced regulator, muscle 1.
    
 
 0.712
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.