STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB4Homeobox B4. (289 aa)    
Predicted Functional Partners:
HOXB3
Homeobox B3.
   
  
0.843
HOXB5
Homeobox B5.
  
 
0.810
HOXB7
Homeobox B7.
  
 
0.755
HOXB6
Homeobox B6.
   
 
0.694
HOXA7
Homeobox A7.
  
 
0.647
HOXD4
Homeobox D4.
  
 
0.640
HOXC4
Homeobox C4.
  
 
0.633
HOXC6
Homeobox C6.
   
 
0.611
HOXA6
Homeobox A6.
   
 
0.600
HOXC5
Homeobox C5.
   
 
0.587
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.