STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR1SWI5 dependent homologous recombination repair protein 1. (243 aa)    
Predicted Functional Partners:
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.677
SWI5
Uncharacterized protein.
    
 
 0.615
MEIOB
Meiosis specific with OB-fold.
      
 0.598
PRPF18
SFM domain-containing protein.
      
 0.561
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.515
GCC1
GRIP and coiled-coil domain containing 1.
      
 0.511
ZNF608
Zinc finger protein 608.
      
 0.495
MND1
Meiotic nuclear divisions 1.
      
 0.493
ZBTB17
Zinc finger and BTB domain containing 17.
      
 0.485
RAD54L2
RAD54 like 2.
      
 0.435
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.