STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2AF1Uncharacterized protein. (371 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.989
U2AF1L4
U2 small nuclear RNA auxiliary factor 1 like 4.
  
 
 
0.903
SRSF2
Serine and arginine rich splicing factor 2.
   
 
 0.767
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.746
SF3A1
Splicing factor 3a subunit 1.
   
 
 0.676
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 
 0.667
SMNDC1
Survival motor neuron domain containing 1.
   
 
 0.666
TRA2B
Transformer 2 beta homolog.
   
 
 0.618
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.614
RBM5
RNA binding motif protein 5.
   
 
 0.608
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.