STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000061643SMAP domain-containing protein. (87 aa)    
Predicted Functional Partners:
VTN
SMB domain-containing protein.
      
 0.515
GPR142
G-protein coupled receptor 142; Belongs to the G-protein coupled receptor 1 family.
      
 0.483
PPFIA2
PTPRF interacting protein alpha 2.
      
 0.482
SHCBP1
SHC binding and spindle associated 1.
      
 0.479
CDC123
Cell division cycle 123.
   
    0.476
ANGPTL7
Angiopoietin like 7.
      
 0.468
SUB1
SUB1 regulator of transcription.
   
    0.463
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.460
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
    0.420
ENSCAFP00000049197
Uncharacterized protein; Belongs to the SKP1 family.
   
    0.420
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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