STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf116Chromosome 9 open reading frame 116. (161 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.995
C34H5orf49
Chromosome 34 C5orf49 homolog.
    
 
 0.982
ARMC3
Armadillo repeat containing 3.
   
 
 0.959
C16H4orf47
Chromosome 16 C4orf47 homolog.
      
 0.949
IQUB
IQ motif and ubiquitin domain containing.
    
 
 0.923
LOC490081
Uncharacterized protein.
   
 
 0.920
C15orf65
Chromosome 15 open reading frame 65.
    
 
 0.911
TEKT3
Tektin 3.
   
 
 0.906
C20H19orf71
Chromosome 20 C19orf71 homolog.
    
 
 0.899
CFAP126
Cilia and flagella associated protein 126.
   
   0.897
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.