STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNKDPNKD metallo-beta-lactamase domain containing. (401 aa)    
Predicted Functional Partners:
TMEM230
Transmembrane protein 230.
    
 
 0.800
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.791
PCDH10
Protocadherin 10.
      
 0.563
SUOX
Sulfite oxidase.
   
  
 0.542
PLCD4
Phosphoinositide phospholipase C.
   
  
 0.521
GLOD4
Glyoxalase domain containing 4.
  
 
 0.514
CCDC88A
Coiled-coil domain containing 88A.
      
 0.513
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
 0.505
ENSCAFP00000051911
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.505
METTL6
SH3 domain binding protein 5.
   
  
 0.505
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.