STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD9Homeobox domain-containing protein. (87 aa)    
Predicted Functional Partners:
HOXC6
Homeobox C6.
   
 
0.898
HOXC10
Homeobox C13.
   
 
0.806
PBX1
PBX homeobox 1.
    
 
 0.799
PBX2
PBX homeobox 2.
    
 
 0.685
PBX4
PBX homeobox 4.
    
 
 0.685
PBX3
PBX homeobox 3.
    
 
 0.685
MEIS1
Meis homeobox 1.
    
 
 0.629
SHOX
Short stature homeobox.
    
 
 0.575
MEIS2
Meis homeobox 2.
    
 
 0.564
HOXB6
Homeobox B6.
   
 
0.558
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.