STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC38Tetratricopeptide repeat domain 38. (469 aa)    
Predicted Functional Partners:
CLIP3
CAP-Gly domain containing linker protein 3.
   
  
 0.808
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
 
 
  
 0.768
FAM118A
Family with sequence similarity 118 member A.
      
 0.709
HSD17B8
Zinc transporter SLC39A7; Zinc transporter, that transports Zn(2+) from the endoplasmic reticulum/Golgi apparatus to the cytosol; Belongs to the ZIP transporter (TC 2.A.5) family. KE4/Catsup subfamily.
   
  
 0.673
KIAA1958
KIAA1958.
      
 0.669
RCAN3
RCAN family member 3.
      
 0.566
ENOSF1
Enolase superfamily member 1.
   
  
 0.556
PTER
Phosphotriesterase related; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family.
   
  
 0.521
PLXDC2
Plexin domain containing 2.
      
 0.515
ZCCHC17-2
Uncharacterized protein.
      
 0.503
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.