STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain-containing protein 39; Required for assembly of dynein regulatory complex (DRC) and inner dynein arm (IDA) complexes, which are responsible for ciliary beat regulation, thereby playing a central role in motility in cilia and flagella. Probably acts together with CCDC40 to form a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella. Not required for outer dynein arm complexes assembly. (920 aa)    
Predicted Functional Partners:
GAA
Glucosidase alpha, acid.
    
 
 0.913
RSPH9
Radial spoke head 9 homolog.
    
 
 0.849
CCDC65
Coiled-coil domain containing 65.
   
 
 0.845
CCDC103
Coiled-coil domain containing 103.
   
  
 0.835
DNAAF3
Dynein axonemal assembly factor 3.
      
 0.831
IFT122
Intraflagellar transport 122.
   
 
 0.831
FAM227A
Family with sequence similarity 227 member A.
   
    0.805
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.803
DNAI2
Dynein axonemal intermediate chain 2.
   
  
 0.802
DNAH5
Dynein axonemal heavy chain 5.
   
 
 0.796
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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