STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000062547Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
FAM234A
Family with sequence similarity 234 member A.
      
 0.608
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.604
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
      
 0.563
ARHGAP1
Cdc42 GTPase-activating protein.
      
 0.515
BCL2L15
BCL2 like 15.
      
 0.515
GLRX3
Glutaredoxin 3.
      
 0.515
FGD4
FYVE, RhoGEF and PH domain containing 4.
      
 0.512
LMO2
LIM domain only 2.
    
 
 0.509
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.503
RNF122
Ring finger protein 122.
   
  
 0.501
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.