STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX4LIM homeobox 4. (400 aa)    
Predicted Functional Partners:
POU1F1
Pituitary-specific positive transcription factor 1; Transcription factor involved in the specification of the lactotrope, somatotrope, and thyrotrope phenotypes in the developing anterior pituitary. Activates growth hormone and prolactin genes. Specifically binds to the consensus sequence 5'-TAAAT-3'.
   
 
 0.724
CCDC136
Coiled-coil domain containing 136.
      
 0.672
ISL1
ISL LIM homeobox 1.
   
 
0.652
J9P914_CANLF
Uncharacterized protein.
   
 
 0.652
LDB1
LIM domain binding 1.
    
 
 0.648
PITX1
Homeobox protein.
   
  
 0.614
ALX3
ALX homeobox 3.
   
 
0.599
LDB2
LIM domain binding 2.
   
 
 0.575
ZNF354C
Zinc finger protein 354C.
    
 
 0.568
ISOC1
Isochorismatase domain containing 1.
      
 0.557
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.