Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | DDX6 | ENSCAFP00000043303 | ENSCAFP00000018313 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.759 |
| AGO2 | ENSCAFP00000063024 | ENSCAFP00000043303 | ENSCAFP00000063024 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | CSD_1 domain-containing protein. | 0.559 |
| AGO2 | G3BP1 | ENSCAFP00000043303 | ENSCAFP00000054602 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | G3BP stress granule assembly factor 1. | 0.521 |
| AGO2 | PABPC1 | ENSCAFP00000043303 | ENSCAFP00000039955 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.490 |
| AGO2 | PABPC4 | ENSCAFP00000043303 | ENSCAFP00000004588 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.422 |
| DCN | ENSCAFP00000063024 | ENSCAFP00000009230 | ENSCAFP00000063024 | Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | CSD_1 domain-containing protein. | 0.520 |
| DDX21 | ENSCAFP00000063024 | ENSCAFP00000020343 | ENSCAFP00000063024 | DExD-box helicase 21. | CSD_1 domain-containing protein. | 0.449 |
| DDX21 | G3BP1 | ENSCAFP00000020343 | ENSCAFP00000054602 | DExD-box helicase 21. | G3BP stress granule assembly factor 1. | 0.426 |
| DDX21 | HNRNPU | ENSCAFP00000020343 | ENSCAFP00000023283 | DExD-box helicase 21. | Heterogeneous nuclear ribonucleoprotein U. | 0.545 |
| DDX21 | PABPC1 | ENSCAFP00000020343 | ENSCAFP00000039955 | DExD-box helicase 21. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.522 |
| DDX21 | SYNCRIP | ENSCAFP00000020343 | ENSCAFP00000004514 | DExD-box helicase 21. | Synaptotagmin binding cytoplasmic RNA interacting protein. | 0.641 |
| DDX6 | AGO2 | ENSCAFP00000018313 | ENSCAFP00000043303 | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.759 |
| DDX6 | ENSCAFP00000063024 | ENSCAFP00000018313 | ENSCAFP00000063024 | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | CSD_1 domain-containing protein. | 0.518 |
| DDX6 | G3BP1 | ENSCAFP00000018313 | ENSCAFP00000054602 | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | G3BP stress granule assembly factor 1. | 0.637 |
| DDX6 | PABPC1 | ENSCAFP00000018313 | ENSCAFP00000039955 | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.686 |
| DDX6 | PABPC4 | ENSCAFP00000018313 | ENSCAFP00000004588 | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.690 |
| ENSCAFP00000063024 | AGO2 | ENSCAFP00000063024 | ENSCAFP00000043303 | CSD_1 domain-containing protein. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.559 |
| ENSCAFP00000063024 | DCN | ENSCAFP00000063024 | ENSCAFP00000009230 | CSD_1 domain-containing protein. | Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | 0.520 |
| ENSCAFP00000063024 | DDX21 | ENSCAFP00000063024 | ENSCAFP00000020343 | CSD_1 domain-containing protein. | DExD-box helicase 21. | 0.449 |
| ENSCAFP00000063024 | DDX6 | ENSCAFP00000063024 | ENSCAFP00000018313 | CSD_1 domain-containing protein. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.518 |
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