STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000063214Uncharacterized protein; Belongs to the complex I LYR family. (63 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
   0.829
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.665
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.659
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.659
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.648
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.644
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.640
MRPL23
Uncharacterized protein.
   
 
 0.627
MRPL43
Mitochondrial ribosomal protein L43.
   
   0.620
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.619
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.