STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX25Sorting nexin 25. (950 aa)    
Predicted Functional Partners:
RAB9B
RAB9B, member RAS oncogene family.
    
 
 0.765
RAB33A
RAB33A, member RAS oncogene family.
      
 0.721
ANKRD10
Ankyrin repeat domain 10.
   
 
 0.717
CDKL3
Cyclin dependent kinase like 3.
   
  
 0.658
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.652
CEP19
Centrosomal protein 19.
      
 0.632
RGS21
Regulator of G protein signaling 21.
   
  
 0.630
RGS13
Regulator of G protein signaling 13.
   
  
 0.625
RGS16
Regulator of G protein signaling 16.
   
  
 0.621
PCDH20
Protocadherin 20.
      
 0.612
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.