STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4IP1Reticulon 4 interacting protein 1. (415 aa)    
Predicted Functional Partners:
TMEM126A
Transmembrane protein 126A.
   
  
 0.690
SOBP
Sine oculis binding protein homolog.
      
 0.690
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
  
 0.682
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
  
 0.638
MRPL38
Mitochondrial ribosomal protein L38.
   
  
 0.587
NAP1L1
Nucleosome assembly protein 1 like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
  
 0.581
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.575
ENSCAFP00000048707
SCP2 domain-containing protein.
  
 0.571
FASN
Fatty acid synthase.
  
 0.570
MRPL30
Ribosomal_L30 domain-containing protein.
   
  
 0.569
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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