STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATD3AUncharacterized protein. (182 aa)    
Predicted Functional Partners:
PCID2
PCI domain containing 2.
      
 0.676
PUSL1
Pseudouridine synthase like 1.
      
 0.653
CRLF3
Cytokine receptor like factor 3.
      
 0.636
RUNDC3A
RUN domain containing 3A.
      
 0.611
HYI
Hydroxypyruvate isomerase (putative).
      
 0.563
MAPRE2
Microtubule associated protein RP/EB family member 2.
      
 0.526
B3GNT4
Hexosyltransferase.
      
 0.517
SGMS2
Sphingomyelin synthase 2.
      
 0.515
F1PA57_CANLF
HIG1 domain-containing protein.
   
  
 0.514
HIGD2A
HIG1 domain-containing protein.
   
  
 0.514
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.