Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADGRL1 | LOC491698 | ENSCAFP00000058897 | ENSCAFP00000063732 | Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family. | TIR domain-containing protein. | 0.641 |
ADGRL2 | LOC491698 | ENSCAFP00000045291 | ENSCAFP00000063732 | Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family. | TIR domain-containing protein. | 0.641 |
ADGRL3 | LOC491698 | ENSCAFP00000062550 | ENSCAFP00000063732 | Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family. | TIR domain-containing protein. | 0.641 |
ENSCAFP00000047314 | LOC491698 | ENSCAFP00000047314 | ENSCAFP00000063732 | Uncharacterized protein. | TIR domain-containing protein. | 0.425 |
ENSCAFP00000047314 | RAG1 | ENSCAFP00000047314 | ENSCAFP00000010152 | Uncharacterized protein. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] | 0.407 |
INTS1 | LOC491698 | ENSCAFP00000065336 | ENSCAFP00000063732 | Integrator complex subunit 1. | TIR domain-containing protein. | 0.450 |
LOC491698 | ADGRL1 | ENSCAFP00000063732 | ENSCAFP00000058897 | TIR domain-containing protein. | Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family. | 0.641 |
LOC491698 | ADGRL2 | ENSCAFP00000063732 | ENSCAFP00000045291 | TIR domain-containing protein. | Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family. | 0.641 |
LOC491698 | ADGRL3 | ENSCAFP00000063732 | ENSCAFP00000062550 | TIR domain-containing protein. | Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family. | 0.641 |
LOC491698 | ENSCAFP00000047314 | ENSCAFP00000063732 | ENSCAFP00000047314 | TIR domain-containing protein. | Uncharacterized protein. | 0.425 |
LOC491698 | INTS1 | ENSCAFP00000063732 | ENSCAFP00000065336 | TIR domain-containing protein. | Integrator complex subunit 1. | 0.450 |
LOC491698 | LY86 | ENSCAFP00000063732 | ENSCAFP00000066384 | TIR domain-containing protein. | Lymphocyte antigen 86. | 0.534 |
LOC491698 | LY96 | ENSCAFP00000063732 | ENSCAFP00000042952 | TIR domain-containing protein. | Lymphocyte antigen 96. | 0.537 |
LOC491698 | PTPRC | ENSCAFP00000063732 | ENSCAFP00000054600 | TIR domain-containing protein. | Protein tyrosine phosphatase receptor type C. | 0.431 |
LOC491698 | RAG1 | ENSCAFP00000063732 | ENSCAFP00000010152 | TIR domain-containing protein. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] | 0.529 |
LOC491698 | RPS3 | ENSCAFP00000063732 | ENSCAFP00000008052 | TIR domain-containing protein. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] | 0.425 |
LY86 | LOC491698 | ENSCAFP00000066384 | ENSCAFP00000063732 | Lymphocyte antigen 86. | TIR domain-containing protein. | 0.534 |
LY86 | LY96 | ENSCAFP00000066384 | ENSCAFP00000042952 | Lymphocyte antigen 86. | Lymphocyte antigen 96. | 0.547 |
LY96 | LOC491698 | ENSCAFP00000042952 | ENSCAFP00000063732 | Lymphocyte antigen 96. | TIR domain-containing protein. | 0.537 |
LY96 | LY86 | ENSCAFP00000042952 | ENSCAFP00000066384 | Lymphocyte antigen 96. | Lymphocyte antigen 86. | 0.547 |
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