STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000064228Uncharacterized protein. (74 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.685
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.591
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 
 0.549
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.543
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.524
ENSCAFP00000065692
Uncharacterized protein.
   
 
 0.524
MATR3
Uncharacterized protein.
   
 
 0.523
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.516
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.512
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.