STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM40Transmembrane protein 40. (262 aa)    
Predicted Functional Partners:
GP1BB
Glycoprotein Ib platelet subunit beta.
   
  
 0.563
SMIM3
Small integral membrane protein 3.
      
 0.562
TNFAIP8L1
TNF alpha induced protein 8 like 1.
      
 0.560
DNAJC1
DnaJ homolog subfamily C member 1.
      
 0.527
PPP1R14C
Protein phosphatase 1 regulatory inhibitor subunit 14C.
      
 0.519
PRTFDC1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.517
POGLUT3
Protein O-glucosyltransferase 3.
      
 0.493
FDXR
NADPH:adrenodoxin oxidoreductase, mitochondrial.
      
 0.487
LITAF
LITAF domain-containing protein.
      
 0.469
TRPC6
Transient receptor potential cation channel subfamily C member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.