STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5H17orf49Chromosome 17 open reading frame 49. (224 aa)    
Predicted Functional Partners:
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
      
 0.529
CHD5
Chromodomain helicase DNA binding protein 5.
    
 
 0.522
BPTF
Bromodomain PHD finger transcription factor.
    
 
 0.518
ACTR5
Actin related protein 5; Belongs to the actin family.
      
 0.501
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.485
DPF3
Double PHD fingers 3.
      
 0.482
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
      
 0.450
PHF10
PHD finger protein 10.
      
 0.450
DPF2
Double PHD fingers 2.
   
  
 0.442
HMGXB4
HMG-box containing 4.
    
 
 0.441
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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