STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000065692Uncharacterized protein. (440 aa)    
Predicted Functional Partners:
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 
 0.825
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.819
DESI1
Desumoylating isopeptidase 1.
    
   0.813
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.794
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 
 0.757
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.746
DHX9
DExH-box helicase 9.
   
 
 0.708
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.685
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.670
DDX5
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.667
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.