STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF141RING finger protein 141; May be involved in spermatogenesis. (287 aa)    
Predicted Functional Partners:
LRRC18
Leucine rich repeat containing 18.
      
 0.704
KCNU1
Potassium calcium-activated channel subfamily U member 1.
      
 0.566
RSPH1
Radial spoke head 1 homolog.
   
  
 0.566
CCDC42
Coiled-coil domain containing 42.
      
 0.561
SPATA4
Spermatogenesis associated 4.
      
 0.560
RNF208
Ring finger protein 208.
   
  
 0.519
RNF181
Ring finger protein 181.
      
 0.501
TSSK6
Testis specific serine kinase 6.
      
 0.499
MALL
Mal, T cell differentiation protein like.
   
  
 0.498
OSTF1
Osteoclast stimulating factor 1.
   
  
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.