RARA protein (Vulpes vulpes) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

RARA

Retinoic acid receptor alpha isoform X2. (500 aa)

Predicted Functional Partners:

RXRA

0.996

PML

0.959

RXRG

0.943

ZBTB16

0.934

RXRB

0.933

SPI1

0.908

NCOR1

0.774

NCOR2

0.740

PROP1

0.672

MED1

0.657

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MED1	NCOR1	ENSVVUP00000001853	ENSVVUP00000042213	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor corepressor 1 isoform X5.	0.480
MED1	NCOR2	ENSVVUP00000001853	ENSVVUP00000037980	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor corepressor 2 isoform X9.	0.513
MED1	RARA	ENSVVUP00000001853	ENSVVUP00000001022	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor alpha isoform X2.	0.657
MED1	RXRA	ENSVVUP00000001853	ENSVVUP00000038604	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-alpha isoform X1.	0.903
MED1	RXRB	ENSVVUP00000001853	ENSVVUP00000035105	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-beta.	0.892
MED1	RXRG	ENSVVUP00000001853	ENSVVUP00000013817	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-gamma.	0.903
NCOR1	MED1	ENSVVUP00000042213	ENSVVUP00000001853	Nuclear receptor corepressor 1 isoform X5.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.480
NCOR1	NCOR2	ENSVVUP00000042213	ENSVVUP00000037980	Nuclear receptor corepressor 1 isoform X5.	Nuclear receptor corepressor 2 isoform X9.	0.930
NCOR1	RARA	ENSVVUP00000042213	ENSVVUP00000001022	Nuclear receptor corepressor 1 isoform X5.	Retinoic acid receptor alpha isoform X2.	0.774
NCOR1	RXRA	ENSVVUP00000042213	ENSVVUP00000038604	Nuclear receptor corepressor 1 isoform X5.	Retinoic acid receptor RXR-alpha isoform X1.	0.922
NCOR1	RXRB	ENSVVUP00000042213	ENSVVUP00000035105	Nuclear receptor corepressor 1 isoform X5.	Retinoic acid receptor RXR-beta.	0.913
NCOR1	RXRG	ENSVVUP00000042213	ENSVVUP00000013817	Nuclear receptor corepressor 1 isoform X5.	Retinoic acid receptor RXR-gamma.	0.913
NCOR1	ZBTB16	ENSVVUP00000042213	ENSVVUP00000022182	Nuclear receptor corepressor 1 isoform X5.	Zinc finger and BTB domain-containing protein 16.	0.693
NCOR2	MED1	ENSVVUP00000037980	ENSVVUP00000001853	Nuclear receptor corepressor 2 isoform X9.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.513
NCOR2	NCOR1	ENSVVUP00000037980	ENSVVUP00000042213	Nuclear receptor corepressor 2 isoform X9.	Nuclear receptor corepressor 1 isoform X5.	0.930
NCOR2	RARA	ENSVVUP00000037980	ENSVVUP00000001022	Nuclear receptor corepressor 2 isoform X9.	Retinoic acid receptor alpha isoform X2.	0.740
NCOR2	RXRA	ENSVVUP00000037980	ENSVVUP00000038604	Nuclear receptor corepressor 2 isoform X9.	Retinoic acid receptor RXR-alpha isoform X1.	0.846
NCOR2	RXRB	ENSVVUP00000037980	ENSVVUP00000035105	Nuclear receptor corepressor 2 isoform X9.	Retinoic acid receptor RXR-beta.	0.803
NCOR2	RXRG	ENSVVUP00000037980	ENSVVUP00000013817	Nuclear receptor corepressor 2 isoform X9.	Retinoic acid receptor RXR-gamma.	0.834
NCOR2	ZBTB16	ENSVVUP00000037980	ENSVVUP00000022182	Nuclear receptor corepressor 2 isoform X9.	Zinc finger and BTB domain-containing protein 16.	0.728