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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGB4High mobility group protein B4. (193 aa)    
Predicted Functional Partners:
IQCF1
IQ domain-containing protein F1-like.
   
 
 0.748
CCDC181
Coiled-coil domain-containing protein 181 isoform X1.
      
 0.745
RASSF3
Ras association domain-containing protein 3.
      
 0.742
ZBTB34
Zinc finger and BTB domain-containing protein 34.
    
 0.718
MEIOB
Meiosis-specific with OB domain-containing protein.
    
 0.648
LOC112925668
High mobility group protein B1-like.
  
0.628
ENTHD1
ENTH domain-containing protein 1.
      
 0.628
ENSVVUP00000014079
annotation not available
  
0.628
ENSVVUP00000027142
annotation not available
  
0.628
HMGB1
High mobility group protein B1.
  
0.623
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.