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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112934555Uncharacterized protein LOC112934555. (891 aa)    
Predicted Functional Partners:
CDCP2
CUB domain-containing protein 2.
      
 0.603
ENSVVUP00000003862
annotation not available
  
    0.521
CACNA1E
Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.
   
  
 0.521
REXO2
Oligoribonuclease, mitochondrial.
      
 0.517
WDR27
WD repeat-containing protein 27 isoform X1.
      
 0.516
WDR27-2
WD repeat-containing protein 27 isoform X5.
      
 0.516
CAPN7
Calpain-7; Belongs to the peptidase C2 family.
      
 0.515
PCDH8
LOW QUALITY PROTEIN: protocadherin-8.
      
 0.513
KPNB1
Importin subunit beta-1.
      
 0.501
TTC4
Tetratricopeptide repeat protein 4.
      
 0.463
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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