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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member. (712 aa)    
Predicted Functional Partners:
LIX1
Protein limb expression 1 homolog.
   
  
 0.641
SLC16A10
Monocarboxylate transporter 10.
   
 
 0.640
SLC16A2
Monocarboxylate transporter 8.
   
 
 0.640
SLC7A5
Large neutral amino acids transporter small subunit 1.
   
  
 0.621
SLC7A1
High affinity cationic amino acid transporter 1.
   
  
 0.610
FADS6
Fatty acid desaturase 6.
      
 0.607
UPRT
Uracil phosphoribosyltransferase homolog isoform X1.
      
 0.603
NTSR2
Neurotensin receptor type 2 isoform X1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.547
APCDD1
Protein APCDD1 isoform X1.
      
 0.516
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.508
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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