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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPJLipase member J. (365 aa)    
Predicted Functional Partners:
PNLIPRP3
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
 
 0.536
PALB2
Partner and localizer of BRCA2 isoform X2.
  
 0.517
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.517
APOB
Apolipoprotein B-100.
   
 
 0.472
TGDS
dTDP-D-glucose 4,6-dehydratase.
   
  
 0.470
LIPC
Hepatic triacylglycerol lipase.
   
 
 0.461
LIPG
Endothelial lipase.
   
 
 0.454
AASDH
Beta-alanine-activating enzyme isoform X1.
     
 0.451
CLPS
Colipase.
      
 0.445
NAA16
N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1.
      
 0.442
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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