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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODC1Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (461 aa)    
Predicted Functional Partners:
ARG2
Arginase.
  
 
 0.973
AGMAT
Agmatinase, mitochondrial; Belongs to the arginase family.
  
 
 0.972
ARG1
Arginase.
  
 
 0.971
OAT
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.970
OAZ1
LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 1.
    
 0.957
SAT1
Diamine acetyltransferase 1.
    
 0.951
AOC1
Amine oxidase.
   
 
 0.942
NQO1
NAD(P)H dehydrogenase [quinone] 1.
    
 0.925
SAT2
Diamine acetyltransferase 2.
    
 0.915
OAZ3
LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 3.
    
 0.862
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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