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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM1-2Pleckstrin homology domain-containing family M member 1 isoform X1. (310 aa)    
Predicted Functional Partners:
LOC112912653
LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1-like.
  
  
 
0.901
PLEKHM1
Pleckstrin homology and RUN domain containing M1.
 
      0.900
PLEKHM3
Pleckstrin homology domain-containing family M member 3.
 
      0.898
DEF8
Differentially expressed in FDCP 8 homolog isoform X1.
 
  
   0.728
VPS39
vam6/Vps39-like protein isoform X1.
   
 
 0.634
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
    
 
 0.611
VPS11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 
 0.592
VPS18
Vacuolar protein sorting-associated protein 18 homolog.
   
 
 0.566
ARHGAP27
Rho GTPase-activating protein 27 isoform X1.
   
  
 0.534
EPG5
Ectopic P granules protein 5 homolog.
   
  
 0.531
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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