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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L3MBTL3Lethal(3)malignant brain tumor-like protein 3 isoform X2. (755 aa)    
Predicted Functional Partners:
MSL3
Male-specific lethal 3 homolog.
   
 
 0.721
CBX8
Chromobox protein homolog 8.
    
 0.676
ZNF467
Zinc finger protein 467.
    
 0.642
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
   
 
 0.629
ZBTB12
Zinc finger and BTB domain-containing protein 12.
    
 0.574
TP53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
   
 0.567
MAML1
Mastermind-like protein 1.
   
  
 0.548
DCAF5
DDB1- and CUL4-associated factor 5 isoform X1.
    
 
 0.511
TFDP1
Transcription factor.
   
 0.482
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.477
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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