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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112911546Protein SET-like; Belongs to the nucleosome assembly protein (NAP) family. (250 aa)    
Predicted Functional Partners:
XPO1
Exportin-1 isoform X1.
    
  0.719
NUP214
LOW QUALITY PROTEIN: nuclear pore complex protein Nup214.
     
 0.717
MCPH1
Microcephalin.
     
 0.712
ANP32E
Acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1.
   
 0.681
ANP32A
Acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X2.
   
 0.681
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.525
LOC112911708
Histone H2A.V.
   
 
 0.525
ANP32B
Acidic leucine-rich nuclear phosphoprotein 32 family member B.
   
 0.468
ENSVVUP00000036796
annotation not available
   
 0.468
SRSF3
Serine/arginine-rich splicing factor 3.
   
  
 0.449
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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