close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3BFibronectin type III domain-containing protein 3B. (1220 aa)    
Predicted Functional Partners:
FIGN
Fidgetin; Belongs to the AAA ATPase family.
    
 0.615
DENND5B
DENN domain-containing protein 5B.
   
  
 0.612
HSPA12A
Heat shock 70 kDa protein 12A isoform X1.
      
 0.607
FBLN7
Fibulin-7.
    
 0.600
LGI3
Leucine-rich repeat LGI family member 3.
    
 0.581
SND1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
      
 0.547
NCEH1
Neutral cholesterol ester hydrolase 1.
      
 0.546
ZNF469
Zinc finger protein 469.
     
 0.519
FGD4
FYVE, RhoGEF and PH domain-containing protein 4 isoform X1.
      
 0.518
RTL1
Retrotransposon-like protein 1.
    
 
 0.516
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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