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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF181E3 ubiquitin-protein ligase RNF181 isoform X1. (199 aa)    
Predicted Functional Partners:
BCL10
B-cell lymphoma/leukemia 10.
   
 0.921
TRIM71
E3 ubiquitin-protein ligase TRIM71.
     
 0.742
UBR7
Putative E3 ubiquitin-protein ligase UBR7.
      
 0.739
USP39
U4/U6.U5 tri-snRNP-associated protein 2 isoform X1.
      
 0.728
UBE2K
Ubiquitin-conjugating enzyme E2 K isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.593
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.575
ENSVVUP00000014764
annotation not available
    
 0.575
UBE2D1
Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.566
UBR5
E3 ubiquitin-protein ligase UBR5.
   
 
 0.566
NTM
Neurotrimin isoform X1.
      
 0.555
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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