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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP8Vesicle-associated membrane protein 8. (101 aa)    
Predicted Functional Partners:
STX17
Syntaxin-17; Belongs to the syntaxin family.
   
 0.999
SNAP29
Synaptosomal-associated protein 29.
   
 0.998
STX4
Syntaxin-4; Belongs to the syntaxin family.
    
 0.996
STX7
Syntaxin-7; Belongs to the syntaxin family.
   
 0.982
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 0.973
BET1
BET1 homolog.
    
 
 0.968
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.962
ENSVVUP00000039660
annotation not available
   
 0.962
STX8
Syntaxin-8.
    
 0.962
VPS39
vam6/Vps39-like protein isoform X1.
    
 
 0.960
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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