close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A5Collagen alpha-5(VI) chain. (2366 aa)    
Predicted Functional Partners:
P4HB
Protein disulfide-isomerase.
    
 0.688
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.641
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.626
COL5A2
Collagen alpha-2(V) chain.
     
 0.609
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X2.
   
 0.584
FBN1
Fibrillin-1.
   
 0.583
COL6A2
Collagen alpha-2(VI) chain.
   
0.568
ITGA6
Integrin alpha-6 isoform X1; Belongs to the integrin alpha chain family.
    
 0.567
ITGAV
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 0.564
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.561
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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