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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (421 aa)    
Predicted Functional Partners:
SARNP
SAP domain-containing ribonucleoprotein.
   
 0.979
CHTOP
Chromatin target of PRMT1 protein isoform X1.
   
 0.962
ZC3H11A
Zinc finger CCCH domain-containing protein 11A.
     
 0.954
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.930
THOC2
THO complex subunit 2 isoform X4.
   
 0.910
THOC5
THO complex subunit 5 homolog isoform X2.
   
 0.896
DDX39B
Spliceosome RNA helicase DDX39B isoform X1.
   
 0.892
DDX39A
ATP-dependent RNA helicase DDX39A.
   
 0.892
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.878
NCBP1
Nuclear cap-binding protein subunit 1 isoform X1.
    
 0.871
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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