close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18Protein SSXT isoform X3. (418 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.887
SMARCD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.
   
 0.821
PHF10
PHD finger protein 10 isoform X1.
    
 0.816
BRD9
Bromodomain-containing protein 9 isoform X6.
   
 0.810
BCL7A
B-cell CLL/lymphoma 7 protein family member A.
    
 0.792
SMARCD3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3.
   
 0.761
ARID2
AT-rich interactive domain-containing protein 2 isoform X1.
    
 0.756
DPF2
Zinc finger protein ubi-d4 isoform X2.
    
 
 0.756
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 0.749
ARID1B
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B.
    
 0.738
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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