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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAT3LOW QUALITY PROTEIN: probable inactive tRNA-specific adenosine deaminase-like protein 3. (386 aa)    
Predicted Functional Partners:
ADAT2
tRNA-specific adenosine deaminase 2.
   
 0.988
SMUG1
Single-strand selective monofunctional uracil DNA glycosylase.
   
 0.928
TYMS
Thymidylate synthase isoform X1.
  
 
 0.767
UPRT
Uracil phosphoribosyltransferase homolog isoform X1.
   
 0.710
NT5E
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.696
TK1
Thymidine kinase.
    
 0.693
UPP1
Uridine phosphorylase 1.
     
 0.626
ELP2
Elongator complex protein 2 isoform X3.
   
  
 0.609
OAT
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.598
NAGS
N-acetylglutamate synthase, mitochondrial.
    
  0.594
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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