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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISD3CDGSH iron-sulfur domain-containing protein 3, mitochondrial. (115 aa)    
Predicted Functional Partners:
ODF3L1
Outer dense fiber protein 3-like protein 1.
      
 0.748
CPEB2
Cytoplasmic polyadenylation element-binding protein 2 isoform X1.
      
 0.746
SURF1
SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family.
    
 
 0.733
MRPL24
39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
   
   0.667
MRPL13
39S ribosomal protein L13, mitochondrial.
   
   0.637
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
   
   0.631
MRPL21
39S ribosomal protein L21, mitochondrial isoform X1.
   
   0.628
ATXN7L3B
Ataxin-7-like protein 3B.
      
 0.617
DNAJC30
dnaJ homolog subfamily C member 30.
      
 0.611
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.610
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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