LOC112906999 protein (Vulpes vulpes) - STRING interaction network

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LOC112906999

Putative RNA-binding protein Luc7-like 2 isoform X1. (408 aa)

Predicted Functional Partners:

RBM25

0.943

SNRPD1

0.901

SART1

0.852

TCERG1

0.840

SF3B3

0.812

SNRPN

0.806

SNRNP70

0.798

PRPF40B

0.775

SF3B1

0.762

SNRPD3

0.756

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC112906999	PRPF40B	ENSVVUP00000003201	ENSVVUP00000029773	Putative RNA-binding protein Luc7-like 2 isoform X1.	pre-mRNA-processing factor 40 homolog B isoform X1.	0.775
LOC112906999	RBM25	ENSVVUP00000003201	ENSVVUP00000005648	Putative RNA-binding protein Luc7-like 2 isoform X1.	RNA-binding protein 25.	0.943
LOC112906999	SART1	ENSVVUP00000003201	ENSVVUP00000037843	Putative RNA-binding protein Luc7-like 2 isoform X1.	U4/U6.U5 tri-snRNP-associated protein 1.	0.852
LOC112906999	SF3B1	ENSVVUP00000003201	ENSVVUP00000036121	Putative RNA-binding protein Luc7-like 2 isoform X1.	Splicing factor 3B subunit 1 isoform X1.	0.762
LOC112906999	SF3B3	ENSVVUP00000003201	ENSVVUP00000024472	Putative RNA-binding protein Luc7-like 2 isoform X1.	Splicing factor 3B subunit 3.	0.812
LOC112906999	SNRNP70	ENSVVUP00000003201	ENSVVUP00000031590	Putative RNA-binding protein Luc7-like 2 isoform X1.	U1 small nuclear ribonucleoprotein 70 kDa isoform X1.	0.798
LOC112906999	SNRPD1	ENSVVUP00000003201	ENSVVUP00000005104	Putative RNA-binding protein Luc7-like 2 isoform X1.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.901
LOC112906999	SNRPD3	ENSVVUP00000003201	ENSVVUP00000026351	Putative RNA-binding protein Luc7-like 2 isoform X1.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.756
LOC112906999	SNRPN	ENSVVUP00000003201	ENSVVUP00000024527	Putative RNA-binding protein Luc7-like 2 isoform X1.	Small nuclear ribonucleoprotein-associated protein.	0.806
LOC112906999	TCERG1	ENSVVUP00000003201	ENSVVUP00000028924	Putative RNA-binding protein Luc7-like 2 isoform X1.	Transcription elongation regulator 1 isoform X1.	0.840
PRPF40B	LOC112906999	ENSVVUP00000029773	ENSVVUP00000003201	pre-mRNA-processing factor 40 homolog B isoform X1.	Putative RNA-binding protein Luc7-like 2 isoform X1.	0.775
PRPF40B	RBM25	ENSVVUP00000029773	ENSVVUP00000005648	pre-mRNA-processing factor 40 homolog B isoform X1.	RNA-binding protein 25.	0.951
PRPF40B	SART1	ENSVVUP00000029773	ENSVVUP00000037843	pre-mRNA-processing factor 40 homolog B isoform X1.	U4/U6.U5 tri-snRNP-associated protein 1.	0.848
PRPF40B	SF3B1	ENSVVUP00000029773	ENSVVUP00000036121	pre-mRNA-processing factor 40 homolog B isoform X1.	Splicing factor 3B subunit 1 isoform X1.	0.560
PRPF40B	SF3B3	ENSVVUP00000029773	ENSVVUP00000024472	pre-mRNA-processing factor 40 homolog B isoform X1.	Splicing factor 3B subunit 3.	0.801
PRPF40B	SNRNP70	ENSVVUP00000029773	ENSVVUP00000031590	pre-mRNA-processing factor 40 homolog B isoform X1.	U1 small nuclear ribonucleoprotein 70 kDa isoform X1.	0.719
PRPF40B	SNRPD1	ENSVVUP00000029773	ENSVVUP00000005104	pre-mRNA-processing factor 40 homolog B isoform X1.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.840
PRPF40B	SNRPD3	ENSVVUP00000029773	ENSVVUP00000026351	pre-mRNA-processing factor 40 homolog B isoform X1.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.634
PRPF40B	SNRPN	ENSVVUP00000029773	ENSVVUP00000024527	pre-mRNA-processing factor 40 homolog B isoform X1.	Small nuclear ribonucleoprotein-associated protein.	0.712
RBM25	LOC112906999	ENSVVUP00000005648	ENSVVUP00000003201	RNA-binding protein 25.	Putative RNA-binding protein Luc7-like 2 isoform X1.	0.943