STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112928152LOW QUALITY PROTEIN: fer-1-like protein 4. (1800 aa)    
Predicted Functional Partners:
NUP62CL
Nucleoporin-62 C-terminal-like protein isoform X1.
   
    0.650
CCSAP
Centriole, cilia and spindle-associated protein.
      
 0.532
CEP72
Centrosomal protein of 72 kDa.
      
 0.515
SLC17A8
Vesicular glutamate transporter 3.
     
 0.501
DUSP22
Dual specificity protein phosphatase 22 isoform X1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.461
VAMP2
Vesicle-associated membrane protein 2.
     
 0.461
WDFY3
WD repeat and FYVE domain-containing protein 3 isoform X6.
      
 0.457
PCDHB7
Protocadherin beta-7-like.
      
 0.457
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
   
  
 0.449
PCMTD1
protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1.
      
 0.431
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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