Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOLC1Nucleolar and coiled-body phosphoprotein 1 isoform X3. (693 aa)    
Predicted Functional Partners:
NOP56
Nucleolar protein 56.
   
 
 0.969
NOP58
Nucleolar protein 58 isoform X1.
   
 
 0.941
DKC1
H/ACA ribonucleoprotein complex subunit DKC1.
   
 
 0.884
ENSVVUP00000029631
annotation not available
   
 
 0.884
FBLL1
rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1.
   
 
 0.881
FBL
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.881
TCOF1
Treacle protein isoform X2.
   
 
 0.847
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
   0.847
CEBPZ
CCAAT/enhancer-binding protein zeta.
   
   0.842
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.833
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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