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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM24Transcription intermediary factor 1-alpha. (961 aa)    
Predicted Functional Partners:
TRIM33
E3 ubiquitin-protein ligase TRIM33.
    
 
0.664
SMAD4
Mothers against decapentaplegic homolog.
   
 0.638
TRIM28
Transcription intermediary factor 1-beta.
    
 
0.629
ESR1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.624
SMARCAD1
annotation not available
   
 
 0.585
SMAD3
Mothers against decapentaplegic homolog.
   
 0.556
SMAD2
Mothers against decapentaplegic homolog.
   
 0.556
SPOP
Speckle-type POZ protein.
   
 
 0.538
CDC27
Cell division cycle protein 27 homolog isoform X1.
   
  0.526
ANAPC4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
   0.524
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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