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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM7E3 ubiquitin-protein ligase TRIM7 isoform X1. (535 aa)    
Predicted Functional Partners:
GYG1
Glycogenin-1 isoform X1.
   
 
 0.922
ARMC12
Armadillo repeat-containing protein 12.
    
 
 0.818
GYG2
Glycogenin-2 isoform X1.
   
 
 0.766
KLHL40
Kelch-like protein 40 isoform X1.
   
 
 0.732
AKTIP
AKT-interacting protein isoform X2.
    
 
 0.635
NKIRAS2
NF-kappa-B inhibitor-interacting Ras-like protein 2.
      
 0.621
LOC112911548
Breast cancer metastasis-suppressor 1 homolog.
    
 
 0.588
BRMS1
Breast cancer metastasis-suppressor 1 isoform X3.
    
 
 0.588
CUNH1orf116
Specifically androgen-regulated gene protein.
      
 0.562
TRIM46
Tripartite motif-containing protein 46 isoform X2.
      
 0.517
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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