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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC61Coiled-coil domain-containing protein 61 isoform X5. (557 aa)    
Predicted Functional Partners:
PNKP
Bifunctional polynucleotide phosphatase/kinase.
   
  
 0.719
NPY
Pro-neuropeptide Y.
    
 0.717
PYY
Peptide YY.
    
 0.717
ERGIC2
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
      
 0.713
ZNF461
Zinc finger protein 461 isoform X1.
      
 0.639
ZNF382
Zinc finger protein 382 isoform X2.
      
 0.632
ZNF529
Zinc finger protein 529.
      
 0.607
PNPO
Pyridoxine-5'-phosphate oxidase.
      
 0.605
DOK6
Docking protein 6.
      
 0.605
FNDC4
Fibronectin type III domain-containing protein 4.
   
  
 0.565
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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